The detailed information of tRNA gene sequence


Sequence ID>WENV170019277
Genome IDBBPD01007525
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3139
End posion on genome 3048
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctatattttc
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGACGAATGCGGCGGTCTCGAAAACCGTTATCCGTCTTAAAACG
GATCGGGGGTTCAAATCCCTTCCCCTCCGCCA
Downstream region at tRNA end position 
aagaaccccg
Secondary structure (Cloverleaf model)
>WENV170019277	Ser	CGA
                   c      GCCA aagaaccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TATCCGTCTTAAAACGGATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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