The detailed information of tRNA gene sequence


Sequence ID>WENV170019282
Genome IDBBPD01007638
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 244
End posion on genome 153
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataaatctaa
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCACTCGCCTCGAAAGCGAGCAGGGAGTTCTAACTC
CCTCGACGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttagttatc
Secondary structure (Cloverleaf model)
>WENV170019282	Ser	CGA
                   a      GCCA gttagttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | |   | |     A
    G       G T C G       G A C G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAGGGAGTTCTAACTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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