The detailed information of tRNA gene sequence


Sequence ID>WENV170019286
Genome IDBBPD01007681
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3063
End posion on genome 3138
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taactaattt
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGCAGAGTAGTGGTCTCCAAAACCATTGGTTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
caatttatcc
Secondary structure (Cloverleaf model)
>WENV170019286	Trp	CCA
                   t      GCCA caatttatcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      C A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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