The detailed information of tRNA gene sequence


Sequence ID>WENV170019314
Genome IDBBPD01008395
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 356
End posion on genome 267
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggacatac
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTTATGGAGCTGGTCTTGAAAACCAGTGATGCCTTAAGGGCA
CCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tgaaggaaat
Secondary structure (Cloverleaf model)
>WENV170019314	Ser	TGA
                   c      GCCA tgaaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | | |                 T T
    T       T G G A
      T T A        G     TGATGCCTTAAGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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