The detailed information of tRNA gene sequence


Sequence ID>WENV170019319
Genome IDBBPD01008453
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3802
End posion on genome 3715
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacggaatat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCACCGCCTTGGAAAGGCGGCATACCGTAAGGTATC
GTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aaattcggaa
Secondary structure (Cloverleaf model)
>WENV170019319	Ser	GGA
                   t      GCCA aaattcggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        A     CATACCGTAAGGTATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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