The detailed information of tRNA gene sequence


Sequence ID>WENV170019325
Genome IDBBPD01008486
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3349
End posion on genome 3270
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccttaaataT
tRNA gene sequence 
GGACCCGTAGTGTAGCCCGGTTTAACACGTCTCCCTGTCACGGAGAAGATCGTGGGTTCA
AATCCCATCGGGTCCGCCC
Downstream region at tRNA end position 
cctaaaaggc
Secondary structure (Cloverleaf model)
>WENV170019325	Asp	GTC
                   T      GCCC cctaaaaggc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
    C C G A        A      + | | | |     A
  C         T G T G       G T G G G     C
  G         | | | |                 T T
  G         A C A C
    T T T A        G     AGATC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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