The detailed information of tRNA gene sequence


Sequence ID>WENV170019330
Genome IDBBPD01008510
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 549
End posion on genome 472
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atttatatta
tRNA gene sequence 
GGGGTAGTAGTTCAGTTGGCCTAGAATGTCTGCCTGTCACGCAGAAGATCGCGGGTTCGA
ATCCCGTCTACCCCGCCA
Downstream region at tRNA end position 
agcatcaaaa
Secondary structure (Cloverleaf model)
>WENV170019330	Asp	GTC
                   a      GCCA agcatcaaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  G         C T T G       G C G G G     C
  G         | | | +                 T T
  C         G A A T
    C T A          G     AGATC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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