The detailed information of tRNA gene sequence


Sequence ID>WENV170019349
Genome IDBBPD01008902
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2302
End posion on genome 2391
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagaaaaaat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCGAATGGGACACGGTGCTAACGTGTTGTCTCGGAAACGGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019349	Ser	GCT
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCTCGGAAACGGGACC
                    A - T
                    C - G
                    A - T
                    C - G
                    G - C
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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