The detailed information of tRNA gene sequence


Sequence ID>WENV170019352
Genome IDBBPD01008910
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 248
End posion on genome 159
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tctttgttat
tRNA gene sequence 
GGAGAGTTGTCCGAGTGGCTTAAGGAGCTGGTCTCGAAAACCAGTGTACGCGTAAGCGTA
CCCAGGGTTCAAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
aattaagacg
Secondary structure (Cloverleaf model)
>WENV170019352	Ser	CGA
                   t      GCCA aattaagacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G C C T       C A G G G     C
    G         | | |                 T T
    C       A G G A
      T T A        G     TGTACGCGTAAGCGTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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