The detailed information of tRNA gene sequence


Sequence ID>WENV170019354
Genome IDBBPD01009019
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 548
End posion on genome 472
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagtcttga
tRNA gene sequence 
CGCGGAGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCTCCGCAACCA
Downstream region at tRNA end position 
attaaaaagc
Secondary structure (Cloverleaf model)
>WENV170019354	Met	CAT
                   a      ACCA attaaaaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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