The detailed information of tRNA gene sequence


Sequence ID>WENV170019359
Genome IDBBPD01009071
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 8348
End posion on genome 8271
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaatttccat
tRNA gene sequence 
CGGGGTGTAGCTCAGCCCGGTTAGAGTGCACGGTTCGGGACCGTGAAGTCGGCGGTTCAA
ATCCGCCCACCCCGACCA
Downstream region at tRNA end position 
atctaaacat
Secondary structure (Cloverleaf model)
>WENV170019359	Pro	CGG
                   t      ACCA atctaaacat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C C G C C     A
    C C G A        A      | | | | |     A
  C         C T C G       G G C G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     AAGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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