The detailed information of tRNA gene sequence


Sequence ID>WENV170019361
Genome IDBBPD01009146
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 206
End posion on genome 113
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctatgttttt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCCGATAGCAATCGCCTGCTAAGCGATTAGCCTGCCTCAAAGC
GGGCTCCTGGGTTCAAATCCCAGCCTCTCCGCCA
Downstream region at tRNA end position 
gttattagaa
Secondary structure (Cloverleaf model)
>WENV170019361	Ser	GCT
                   t      GCCA gttattagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       C T G G G     C
    G       + | | |                 T T
    C       T A G C
      C G A        A     TAGCCTGCCTCAAAGCGGGCTC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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