The detailed information of tRNA gene sequence


Sequence ID>WENV170019390
Genome IDBBPD01010014
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 901
End posion on genome 987
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccaaataaac
tRNA gene sequence 
GGAGGGGTCGGATAGTGGTTTATTCCACATGCTTGGAAAGCATGCGAGCGCAAGCTCTCG
TGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
gttgggaaaa
Secondary structure (Cloverleaf model)
>WENV170019390	Ser	GGA
                   c      GCCA gttgggaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      T T A        A     CGAGCGCAAGCTCTC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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