The detailed information of tRNA gene sequence


Sequence ID>WENV170019408
Genome IDBBPD01011163
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 234
End posion on genome 162
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gcatcactct
tRNA gene sequence 
GCCCACGTAGCTCAGCTGGTAGAGCAGGGCTTTCGTAAAGCTCAGGTCGGAGGTTCAATC
CCTCTCGTGGGCTatg
Downstream region at tRNA end position 
aatgttcaag
Secondary structure (Cloverleaf model)
>WENV170019408	Thr	CGT
                   t      Tatg aatgttcaag
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          C T
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    G + T
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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