The detailed information of tRNA gene sequence


Sequence ID>WENV170019420
Genome IDBBPD01011877
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 528
End posion on genome 608
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctaattaaaa
tRNA gene sequence 
GCCGACATCGCATAGTGGTAGTGCACGAGACTGGAAATCTCGGCCCTTCGGGGCCCCTCG
GTTCGATTCCGAGTGTCGGCGttt
Downstream region at tRNA end position 
aaaagatatg
Secondary structure (Cloverleaf model)
>WENV170019420	Ser	GGA
                   a      Gttt aaaagatatg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T T
                    T     G A G C C     A
        G A        C      | | | | |     G
      T     T A C G       C T C G G     C
      G     + | | |                 T T
      G     G T G C
        T A        A     GCCCTTCGGGGCCC
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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