The detailed information of tRNA gene sequence


Sequence ID>WENV170019421
Genome IDBBPD01011877
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2072
End posion on genome 2147
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atttttagaT
tRNA gene sequence 
GAGGCTATGGCGCAGCCCGGTAGCGCACTGCTCTGATAAGGCAGGGGTCCCAGGTTCAAA
TCCTGGTAGCCTCATtt
Downstream region at tRNA end position 
tcatatctct
Secondary structure (Cloverleaf model)
>WENV170019421	Ile	GAT
                   T      ATtt tcatatctct
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     G G T C C     A
      C G A        G      | | | | |     A
    C       C G C G       C C A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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