The detailed information of tRNA gene sequence


Sequence ID>WENV170019427
Genome IDBBPD01012092
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 111
End posion on genome 26
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccacaagaa
tRNA gene sequence 
GGAGGGTTGCGATAATGGCTATTCGGCTGGTTTCGAAAACCAGTGGGAGAAATCCCTTGT
AGGTTCGAATCCTGCACCCTCCGCCA
Downstream region at tRNA end position 
gtcaggattt
Secondary structure (Cloverleaf model)
>WENV170019427	Ser	CGA
                   a      GCCA gtcaggattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      T A A        G      | + | | |     G
    G       T A G C       G T A G G     C
    G         | | |                 T T
    C       T T C G
      T A          G     TGGGAGAAATCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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