The detailed information of tRNA gene sequence


Sequence ID>WENV170019436
Genome IDBBPD01012722
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 443
End posion on genome 532
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cacacaaagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCATCCGCCTCGAAAGCGGAAGAACGGTTACCCGTT
CCGTGAGTTCAAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
cctttggcta
Secondary structure (Cloverleaf model)
>WENV170019436	Ser	CGA
                   c      GCCA cctttggcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     AGAACGGTTACCCGTTCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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