The detailed information of tRNA gene sequence


Sequence ID>WENV170019439
Genome IDBBPD01012930
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 291
End posion on genome 365
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttatattaga
tRNA gene sequence 
GGGTCTGTAGCTCTAACTGGAGAGAGCGCTGGACTCCAAATCCAGGGGTTGGGGGTTCGA
ATCCCTCCAGGCCCGttt
Downstream region at tRNA end position 
atgtttgagg
Secondary structure (Cloverleaf model)
>WENV170019439	Trp	CCA
                   a      Gttt atgtttgagg
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    C A A T        A      | + | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A G A          G     GGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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