The detailed information of tRNA gene sequence


Sequence ID>WENV170019443
Genome IDBBPD01013168
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3723
End posion on genome 3811
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttagtgctgt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGATGGCGCTAGTCTTGAAAACTAGTGATCCTGCAAGGGAC
CGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cacaagtagt
Secondary structure (Cloverleaf model)
>WENV170019443	Ser	TGA
                   t      GCCA cacaagtagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGATCCTGCAAGGGACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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