The detailed information of tRNA gene sequence


Sequence ID>WENV170019447
Genome IDBBPD01013168
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4653
End posion on genome 4742
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcaagtaac
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCGCCCGCCTCGAAAGCGGGTGAACGGTTACCCGTT
CCGTGAGTTCAAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
cttattcttc
Secondary structure (Cloverleaf model)
>WENV170019447	Ser	CGA
                   c      GCCA cttattcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     A
    G       G T C G       G T G A G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGAACGGTTACCCGTTCC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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