The detailed information of tRNA gene sequence


Sequence ID>WENV170019448
Genome IDBBPD01013168
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4783
End posion on genome 4874
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcgagccac
tRNA gene sequence 
GGAGAGGTGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTTCGGGTTTATACCC
CGACGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
taaaaaatca
Secondary structure (Cloverleaf model)
>WENV170019448	Ser	GGA
                   c      GCCA taaaaaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TTCGGGTTTATACCCCGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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