The detailed information of tRNA gene sequence


Sequence ID>WENV170019475
Genome IDBBPD01013680
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2426
End posion on genome 2516
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtgttcatc
tRNA gene sequence 
GGGAAGGTGGTCGAGTGGTCTATGGCTCCGGACTGGAAAGCCGGCGAGGGCTAGTACCCC
TCCGTGGGTTCGAATCCCACCCTTTCCGCCA
Downstream region at tRNA end position 
ttattttagc
Secondary structure (Cloverleaf model)
>WENV170019475	Ser	GGA
                   c      GCCA ttattttagc
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G       + | + |                 T T
    T       T G G C
      C T A        T     CGAGGGCTAGTACCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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