The detailed information of tRNA gene sequence


Sequence ID>WENV170019479
Genome IDBBPD01013749
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1162
End posion on genome 1257
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgtactct
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCGAAGGCGCTCGCCTGGAAAGCGAGTAGATGGGGCAAAAC
CTTGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tattttaaaa
Secondary structure (Cloverleaf model)
>WENV170019479	Ser	GGA
                   t      GCCA tattttaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    C G A          G     TAGATGGGGCAAAACCTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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