The detailed information of tRNA gene sequence


Sequence ID>WENV170019511
Genome IDBBPD01015776
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1164
End posion on genome 1077
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctggaaatat
tRNA gene sequence 
GCCCCGGTGGCGGAATAGGTGAGACGCACGACACTTAAAATGTCGCGATCAGTAATGGTC
ATACGAGTTCGACTCTCGTTTGGGGTACtt
Downstream region at tRNA end position 
aaaagcatgt
Secondary structure (Cloverleaf model)
>WENV170019511	Leu	TAA
                   t      ACtt aaaagcatgt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T
                     G + T          T C
                    T     T G C T C     A
    A T A A        G      | | | | |     G
  G         G G C G       A C G A G     C
  G           | | |                 T T
  T         A C G C
    G A G          A     CGATCAGTAATGGTCAT
                    C - G
                    G - C
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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