The detailed information of tRNA gene sequence


Sequence ID>WENV170019516
Genome IDBBPD01016256
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 392
End posion on genome 466
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aggctagcag
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGAGGACTGCAAATCCTTTATCCCCCGGTTCAAATC
CGGGTGTCGCCTCCA
Downstream region at tRNA end position 
ttttattttt
Secondary structure (Cloverleaf model)
>WENV170019516	Cys	GCA
                   g      TCCA ttttattttt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | | | |     A
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATCC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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