The detailed information of tRNA gene sequence


Sequence ID>WENV170019521
Genome IDBBPD01016390
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 213
End posion on genome 138
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcaccaatt
tRNA gene sequence 
GGAGCTGTGGTGTAGCGGTTAACATGCCGGCCTGTCACGCCGGAGACCGCGGGTTCAATT
CCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttaaaaacta
Secondary structure (Cloverleaf model)
>WENV170019521	Asp	GTC
                   t      GCCA ttaaaaacta
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGACC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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