The detailed information of tRNA gene sequence


Sequence ID>WENV170019524
Genome IDBBPD01016405
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1866
End posion on genome 1937
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaatttttA
tRNA gene sequence 
TTGGGGATAGCATAATGGTAGTGTAAAGATTTGCAAAATCTTTTGTAGTGGTTCGATTCC
ACTTCCCAACTtta
Downstream region at tRNA end position 
tataatgttt
Secondary structure (Cloverleaf model)
>WENV170019524	Cys	GCA
                   A      Ttta tataatgttt
                     T   C
                     T - A
                     G   A
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     T C A C C     A
        A A        A      | | | | |     G
      T     T A C G       A G T G G     C
      G     + | | +                 T T
      G     G T G T
        T A        A     TTGT
                    A - T
                    A - T
                    G - C
                    A - T
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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