The detailed information of tRNA gene sequence


Sequence ID>WENV170019534
Genome IDBBPD01017190
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 582
End posion on genome 505
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caagtggagt
tRNA gene sequence 
GGGCCGGCAGAACAGCCTGGAGTGTTCGCCTCCCTGTCACGGAGGAGATCGCGGGTTCAA
ATCCCGTCTGGCCCGCCT
Downstream region at tRNA end position 
tcggggctac
Secondary structure (Cloverleaf model)
>WENV170019534	Asp	GTC
                   t      GCCT tcggggctac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G + T
                     G - C          T A
                    C     T G C C C     A
    C C G A        A      + | | | |     A
  T         C A A G       G C G G G     C
  G         | | | |                 T T
  G         G T T C
    A G T          G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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