The detailed information of tRNA gene sequence


Sequence ID>WENV170019536
Genome IDBBPD01017399
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1399
End posion on genome 1326
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agttttttgT
tRNA gene sequence 
TGGGGGATAGCTTAATTGGCAAAGCTTCGGTCTCCAAAACCGATGTTAGGGGTTCGATTC
CTCTTCCTCCGGAtt
Downstream region at tRNA end position 
ttaattttta
Secondary structure (Cloverleaf model)
>WENV170019536	Trp	CCA
                   T      GAtt ttaattttta
                     T + G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T          T T
                    T     T C T C C     A
      T A A        A      | | + | |     G
    T       T T C G       A G G G G     C
    G       | | | |                 T T
    G       A A G C
      C A          T     TGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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