The detailed information of tRNA gene sequence


Sequence ID>WENV170019561
Genome IDBBPD01018678
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1675
End posion on genome 1599
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttgattttc
tRNA gene sequence 
AGCGCGGTAGTTCAGTACGGCAGAATGCTAGGCTCATAACCTAGAGGTCGAAGGTTCAAA
TCCTTCCTGCGCTTCCA
Downstream region at tRNA end position 
tttttttatg
Secondary structure (Cloverleaf model)
>WENV170019561	Met	CAT
                   c      TCCA tttttttatg
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C T T C C     A
      T G A        A      | | | | |     A
    A       C T T G       G A A G G     C
    C       | | | +                 T T
    G       G A A T
      G C A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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