The detailed information of tRNA gene sequence


Sequence ID>WENV170019565
Genome IDBBPD01018678
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 491
End posion on genome 415
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgtggttt
tRNA gene sequence 
CGTTGGAAGCTGAACTGGGTGGACAGGCGTTCCTCATAAGAACGACACGGTGAGTTCGAA
CCTCACTCCAACGACCA
Downstream region at tRNA end position 
aacacccgat
Secondary structure (Cloverleaf model)
>WENV170019565	Met	CAT
                   t      ACCA aacacccgat
                     C - G
                     G - C
                     T - A
                     T - A
                     G - C
                     G - C
                     A - T          C A
                    A     C A C T C     A
      T C A        G      | | | | |     G
    G       A G T C       G T G A G     C
    G         | | |                 T T
    G       A C A G
      T G G        G     ACACG
                    C - G
                    G - C
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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