The detailed information of tRNA gene sequence


Sequence ID>WENV170019567
Genome IDBBPD01018833
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 205
End posion on genome 129
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctaattgtc
tRNA gene sequence 
AGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCTCCCGCAACCA
Downstream region at tRNA end position 
gatactcaaa
Secondary structure (Cloverleaf model)
>WENV170019567	Met	CAT
                   c      ACCA gatactcaaa
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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