The detailed information of tRNA gene sequence


Sequence ID>WENV170019588
Genome IDBBPD01020741
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1449
End posion on genome 1538
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agggttagct
tRNA gene sequence 
GGAGAAGTGCCCGAGTGGCTTAAGGGGCGTGCCTGGAGAGCACGTGTGGGTTTATGCTCA
CCCCGGGTTCGAATCCCGGCTTCTCCGCCA
Downstream region at tRNA end position 
ttcaggaaat
Secondary structure (Cloverleaf model)
>WENV170019588	Ser	GGA
                   t      GCCA ttcaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       C C G G G     C
    G         | | |                 T T
    C       A G G G
      T T A        G     TGTGGGTTTATGCTCACC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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