The detailed information of tRNA gene sequence


Sequence ID>WENV170019593
Genome IDBBPD01021675
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1096
End posion on genome 1022
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGCGCGTTAGTCTAGTGGTCAGGACGCCGCCCTCTCAAGGCGGAATCACGGGTTCGAGTC
CCGTACGCGCTACCA
Downstream region at tRNA end position 
tacgcgccaa
Secondary structure (Cloverleaf model)
>WENV170019593	Glu	CTC
                   n      ACCA tacgcgccaa
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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