The detailed information of tRNA gene sequence


Sequence ID>WENV170019595
Genome IDBBPD01021849
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 410
End posion on genome 322
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgtttacatt
tRNA gene sequence 
GGATCTTTCGCACTGAGGCCGAGTGCATGAGCCTGTTAAGCTCACGGGATAATTCCCCAT
CGTCGGTTCGAATCCGACAAGATCCGCAA
Downstream region at tRNA end position 
tttcagccca
Secondary structure (Cloverleaf model)
>WENV170019595	Asn	GTT
                   t      GCAA tttcagccca
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     C A G C C     A
      A G T        C      | | | | |     G
    G       C A C G       G T C G G     C
    G       | | | |                 T T
    C       G T G C
      C G A        A     CGGGATAATTCCCCATC
                    T - A
                    G - C
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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