The detailed information of tRNA gene sequence


Sequence ID>WENV170019603
Genome IDBBPD01023112
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1496
End posion on genome 1581
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacagcctaT
tRNA gene sequence 
GGAGGGCTAGTCTAATGGTAAGGCACCTGACTTGAAATCAGGCGGGTGAAAGCCCATGGG
GGTTCGAGTCCCTCGCCCTCCGTCA
Downstream region at tRNA end position 
attcgcataa
Secondary structure (Cloverleaf model)
>WENV170019603	Ser	TGA
                   T      GTCA attcgcataa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T G
                    T     C T C C C     A
        A A        A      | + | | |     G
      T     T C T G       G G G G G     C
      G     | | + |                 T T
      G     A G G C
        T A        A     CGGGTGAAAGCCCAT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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