The detailed information of tRNA gene sequence


Sequence ID>WENV170019612
Genome IDBBPD01024817
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 521
End posion on genome 595
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
aaacaaaacc
tRNA gene sequence 
GGCCCCGTAGCTCAGCCCGGTTAGAGTACCACGCTCTTAACGTGGGTGTCAAGGGTTCAA
ATCCCTTCGGGGTCAtcg
Downstream region at tRNA end position 
gcaaaattag
Secondary structure (Cloverleaf model)
>WENV170019612	Lys	CTT
                   c      Atcg gcaaaattag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    C C G A        A      | | | | |     A
  C         C T C G       A A G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          A     GTGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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