The detailed information of tRNA gene sequence


Sequence ID>WENV170019616
Genome IDBBPD01025291
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 114
End posion on genome 40
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattcagaa
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCACCGGATTCATAACCCGGAGGTCAGGGGTTCAAG
TCCCCTCCTCGCTACac
Downstream region at tRNA end position 
ctcttggcgc
Secondary structure (Cloverleaf model)
>WENV170019616	Met	CAT
                   a      ACac ctcttggcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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