The detailed information of tRNA gene sequence


Sequence ID>WENV170019634
Genome IDBBPD01027580
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 598
End posion on genome 685
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atgttctttA
tRNA gene sequence 
GGATGAATGGCTGAGCGGTTTAAAGCACCAGACTTGAAATCTGACATGTCAAAATGGCAT
CATGGGTTCGAATCCCATTTTATCCTAta
Downstream region at tRNA end position 
tttaaaannn
Secondary structure (Cloverleaf model)
>WENV170019634	Ser	TGA
                   A      TAta tttaaaannn
                     G - C
                     G - C
                     A - T
                     T - A
                     G + T
                     A - T
                     A - T          T A
                    T     T A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       A T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     CATGTCAAAATGGCATC
                    C   A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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