The detailed information of tRNA gene sequence


Sequence ID>WENV170019644
Genome IDBBPD01028650
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 515
End posion on genome 424
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgaagcagtt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTTAAGGCAACGGTTTGCTAAACCGTCGTAGGGTGTCAAGC
TCTACCGGGGGTTCGAATCCCCCCCTCTCCGCtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170019644	Ser	GCT
                   t      GCtn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G G G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          A     CGTAGGGTGTCAAGCTCTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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