The detailed information of tRNA gene sequence


Sequence ID>WENV170019645
Genome IDBBPD01028650
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 144
End posion on genome 57
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgtttttttg
tRNA gene sequence 
GGAGAGATGGCTGAGTTGGTCGAAAGCGCTCGACTCGAAATCGAGTAGGCTAGTGATAGT
CTCGAGAGTTCGAATCTCTCTCTCTCCGatt
Downstream region at tRNA end position 
gcttgtggtt
Secondary structure (Cloverleaf model)
>WENV170019645	Ser	CGA
                   g      Gatt gcttgtggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C T C     A
    T T G A        G      | | | | |     G
  G         G T C G       G A G A G     C
  G           | | |                 T T
  T         A A G C
    C G A          G     TAGGCTAGTGATAGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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