The detailed information of tRNA gene sequence


Sequence ID>WENV170019646
Genome IDBBPD01028880
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 514
End posion on genome 603
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cccctgcgtc
tRNA gene sequence 
GGAGGAGTGGCGGAGTGGTCGATCGCACCGGTCTTGAAAACCGACGCAGGGGGAACCCTG
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
cttgccctca
Secondary structure (Cloverleaf model)
>WENV170019646	Ser	TGA
                   c      GCCA cttgccctca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        A     CGCAGGGGGAACCCTGCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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