The detailed information of tRNA gene sequence


Sequence ID>WENV170019651
Genome IDBBPD01029182
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 338
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttatattT
tRNA gene sequence 
AGGCTTATAGTTTAAGGGTTAAAACAAACCGCTCATAATGGTTGTATTATAGGTTCGAAT
CCTATTAAGCCTATtt
Downstream region at tRNA end position 
attatataat
Secondary structure (Cloverleaf model)
>WENV170019651	Met	CAT
                   T      ATtt attatataat
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     T A T C C     A
      G A A        A      | | | | |     G
    G       T T T G       A T A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          A     GTATT
                    A - T
                    A - T
                    C - G
                    C - G
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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