The detailed information of tRNA gene sequence


Sequence ID>WENV170019662
Genome IDBBPD01031661
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 89
End posion on genome 16
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caattaatat
tRNA gene sequence 
CGGGCCGTAGTGTAGCGGTAGCACGAGTCCTTCGGGAGGATTTAGCTCCGGTTCAAATCC
GGGCGGCCCGACCA
Downstream region at tRNA end position 
gacgaaactt
Secondary structure (Cloverleaf model)
>WENV170019662	Pro	CGG
                   t      ACCA gacgaaactt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
        G A        A      + | | | |     A
      C     T G T G       T C C G G     C
      G     + | | |                 T T
      G     G C A C
        T A        G     TAGC
                    A - T
                    G + T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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