The detailed information of tRNA gene sequence


Sequence ID>WENV170019700
Genome IDBBPE01000093
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 42446
End posion on genome 42522
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccgaggtg
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCTGGCCGCTCATAACGGCTTGGTCGCGGGTTCGAG
TCCTGCCGGGCCCACCA
Downstream region at tRNA end position 
ctcttctcaa
Secondary structure (Cloverleaf model)
>WENV170019700	Met	CAT
                   g      ACCA ctcttctcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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