The detailed information of tRNA gene sequence


Sequence ID>WENV170019703
Genome IDBBPE01000129
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 48344
End posion on genome 48431
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgccgcacc
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTCGATTGCACCGGTCTTGAAAACCGGCAACCCGCAAGGGTTC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gcgccgaacc
Secondary structure (Cloverleaf model)
>WENV170019703	Ser	TGA
                   c      GCCA gcgccgaacc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACCCGCAAGGGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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