The detailed information of tRNA gene sequence


Sequence ID>WENV170019781
Genome IDBBPE01000624
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 107467
End posion on genome 107541
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagagtgtct
tRNA gene sequence 
GGCTAGGTGACAGAATGGTGATGTGACGGTCTGCAAAACCGGTATATATGGGTTCGATTC
CCGTCCTAGCCTCCA
Downstream region at tRNA end position 
accaagaagg
Secondary structure (Cloverleaf model)
>WENV170019781	Cys	GCA
                   t      TCCA accaagaagg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T T
                    T     T G C C C     A
        A A        G      | + | | |     G
      T     G A C A       A T G G G     C
      G       | | |                 T T
      G     A T G T
        T G        G     TATAT
                    A   G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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