The detailed information of tRNA gene sequence


Sequence ID>WENV170019855
Genome IDBBPE01001054
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6217
End posion on genome 6302
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tgttcaatgt
tRNA gene sequence 
GGACTCGTGGCCGAGTGGCCGATGGCACCATCCTTTTAAGTTGGCAAGAGCAATCTTCAC
CGCTGGTTCAAATCCAGCCGAGTCCTtat
Downstream region at tRNA end position 
ctgtttttgg
Secondary structure (Cloverleaf model)
>WENV170019855	Lys	TTT
                   t      Ttat ctgtttttgg
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    G       G C C G       G C T G G     C
    G       + | | |                 T T
    C       T G G C
      C G A        A     CAAGAGCAATCTTCACC
                    C - G
                    C - G
                    A - T
                    T   T
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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