The detailed information of tRNA gene sequence


Sequence ID>WENV170019893
Genome IDBBPE01001223
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3990
End posion on genome 4065
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gcgtgtgcga
tRNA gene sequence 
GTCCCGTTCGTCTAGAGGCCTAGGACACCAGCCTTTCACGTTGGCAGCACGGGTTCGAAT
CCCGTACGGGACGCCA
Downstream region at tRNA end position 
tcccttgcgg
Secondary structure (Cloverleaf model)
>WENV170019893	Glu	TTC
                   a      GCCA tcccttgcgg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CAGC
                    C - G
                    C - G
                    A - T
                    G + T
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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